Manchester United welcomed back Rooney who had missed their 4-0 win over Newcastle with a toe injury after his manager, David Moyes, declared that the forward would have to play through the pain with an injection.
Atletico on the other hand had to face a full-strength Barcelona lineup with the likes of Lionel Messi and neymar without the services of their top frontman Diego Costa who was out with a hamstring injury.
Here is how all the teams lined up:
Bayern Munich vs Manchester United:
Bayern Munich: Neuer - Dante, Ribéry, Mandzukić, Robben, Boateng, Götze, Lahm (C), Müller, Alaba, Kroos
Substitutes: Raeder - van Buyten, Rafinha, Pizarro, Weiser, Hojbjerg, Weihrauch #FCBMUFC
Manchester United: De Gea; Jones, Smalling, Vidic, Evra; Fletcher, Carrick; Valencia, Rooney, Kagawa; Welbeck
Substitutes: Lindegaard, Büttner, Ferdinand, Giggs, Januzaj, Young, Hernandez
Atletico Madrid vs Barcelona
Atletico Madrid: Courtois, Juanfran, Miranda, Godín, Filipe, Gabi, Koke, Tiago, Raúl García, Adrián, Villa
Substitutes: Dani Aranzubia, Toby Alderweireld, Emiliano Insua, Mario Suarez, Cristian Rodriguez, Jose Sosa, Diego Ribas
Barcelona: Pinto, Fàbregas, Xavi, Iniesta, Messi, Neymar, Mascherano, Bartra, Sergio, Alba, Alves
Substitutes: Oier, Montoya, Song, Adriano, Alexis, Pedro, Sergi Roberto